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Punnett squares for breeders: predicting trait ratios

The 3:1 ratio every breeder should know on sight.

1 min read2026-05-2625 views2 readers finished

A Punnett square is a 2×2 grid that predicts the offspring of a single-gene cross. It's the breeder's back-of-the-napkin math, and it explains why you see what you see in the tent.

The 3:1 ratio

Cross two heterozygotes (Aa × Aa) — say, two plants both carrying one purple allele and one green allele. Their seeds split:

AA (purple/purple)
25%
homozygous dominant
Aa (purple/green)
50%
heterozygous
aa (green/green)
25%
homozygous recessive

Three out of four offspring show the dominant trait. One in four shows the recessive trait. That's the 3:1 ratio, and it's why you're never quite sure which seedling is going to surprise you.

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